An experimentally-supported genome-scale metabolic network reconstruction for Yersinia pestis CO92

BMC Systems Biology

Table 1 Overview of iPC815.

Category	Subsystem	Number
Genes		815
Proteins		678
Metabolites
	Cytoplasm	873
	Periplasm	398
	External	281
	Unique	963
	Total	1552
Metabolic Reactions
	Cytoplasm	932
	Periplasm	133
	GPR-associated	1539
	Non-GPR-associated	139
	Unique	1678
Transport Reactions
	Periplasm <=> External	281
	Cytoplasm <=> Periplasm	332
Exchange Reactions		281
Biomass Objective Functions		2
Total Reactions		1961

To compile the number of unique metabolites, identical compounds appearing in more than one compartment were only counted once. Unique metabolic reactions encompass all reactions except exchange reactions and biomass objective functions.

ISSN: 1752-0509