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Figure 2 | BMC Systems Biology

Figure 2

From: Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates

Figure 2

eLSA pipeline. Users start with raw data (matrices of time series) as input and specify their requirements as parameters. The LSA tools subsequently F-transform and normalize the raw data and calculate Local Similarity (LS) scores and Pearson’s Correlation Coefficients. The tools then assess the statistical significance (P-values) of these correlation statistics using the permutation test and filter out insignificant results. Finally, the tools construct a partially directed association network from the significant associations.

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