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Table 3 A list of 21 Rat genes whose proteins are found to be differentially expressed with statistical significance between FL_vs_CTRL and L_vs_CTRL conditions

From: An integrated proteomics analysis of bone tissues in response to mechanical stimulation

Rat Gene Human Gene FC (CTRL_L) FC (CTRL_FL) FC (FL_L) Max Confidence Peptide Evidence
Capon NOS1AP 6.72884 6.00145 1.1212 0.98 ≥6
Ddx18 DDX18 1.14716 2.13095 -1.85759 0.98 ≥6
Ddx21a DDX21 3.28614 4.10949 -1.25055 0.96 ≥6
Fbf1_predicted FBF1 -3.10292 -2.81444 -1.1025 0.98 ≥6
Fcho2_predicted FCHO2 -1.97277 -2.79227 1.41541 0.98 ≥6
Klk14_predicted KLK14 1.2212 1.88874 -1.54662 0.98 ≥6
LOC301506 FSD1 -2.77612 -3.54757 1.27789 0.99 ≥6
LOC306805 ASPN 1.83348 2.8254 -1.54101 0.99 ≥12
Mrpl45_predicted MRPL45 2.47117 3.98149 -1.61118 0.99 ≥6
Mrpl53_predicted MRPL53 3.70412 1.94325 1.90615 0.96 ≥6
Pdcd8 PDCD8 2.91378 4.15437 -1.42577 0.96 ≥6
Pik4cb PIK4CB -2.77612 -3.54757 1.27789 0.99 ≥6
RGD1562139_predicted RPL29 2.47771 3.28214 -1.32467 0.98 ≥6
Rab40b_predicted RAB40B 5.42109 4.99103 1.08617 0.98 ≥6
Raf1 RAF1 -2.1328 -1.59117 -1.3404 0.97 ≥6
Sema5b_predicted SEMA5B 1.75998 2.60246 -1.47869 0.99 ≥6
Serpinb13_predicted SERPINB13 3.01946 3.82539 -1.26691 0.97 ≥6
Slc1a3 SLC1A3 -1.97126 -2.78988 1.41528 0.98 ≥6
Slc4a3 SLC4A3 2.15184 1.80834 1.18995 0.96 ≥6
Tex101 TEX101 2.007 1.60395 1.25128 0.97 ≥6
Upf2_predicted UPF2 -1.72341 -2.54157 1.47474 0.98 ≥6
  1. * "Max Confidence" was calculated as 1- smallest q-value among all the comparison conditions (FL_L, CTRL_FL, and CTRL_L). "Peptide evidence" refers to total number of peptides per group used to calculate Fold Change (FC) and q-value in groupwise comparisons for protein quantifications.