TIGRESS: Trustful Inference of Gene REgulation using Stability Selection

BMC Systems Biology

Table 2 DREAM5 networks results

Method	Network 1			Network 3			Network 4			Overall
	AUPR	AUROC	Score	AUPR	AUROC	Score	AUPR	AUROC	Score
GENIE3 [20]	0.291	0.815	104.65	0.093	0.617	14.79	0.021	0.518	1.39	40.28
ANOVerence [37]	0.245	0.780	53.98	0.119	0.671	45.88	0.022	0.519	2.21	34.02
Naive TIGRESS	0.301	0.782	87.80	0.069	0.595	4.41	0.020	0.517	1.08	31.1
CLR [14]	0.255	0.773	55.02	0.075	0.590	5.29	0.021	0.516	1.07	20.46
ARACNE [13]	0.187	0.763	24.47	0.069	0.572	3.24	0.018	0.504	1.1e-4	9.24
TIGRESS	0.320	0.789	105.28	0.066	0.589	3.25	0.020	0.514	0.46	36.33

AUPR, AUROC and minus the logarithm of related p-values for all DREAM5 Networks and state-of-the-art methods.

ISSN: 1752-0509