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Table 2 False positive model predictions that indicate incorrectly identified essential genes

From: Gap-filling analysis of the iJO1366 Escherichia coli metabolic network reconstruction for discovery of metabolic functions

Gene

Reason for incorrect phenotype

cydA (b0733)

knocked out successfully by Portnoy et al. [29]

atpC (b3731)

ATP synthase knockout causes low growth rate

atpD (b3732)

ATP synthase knockout causes low growth rate

atpG (b3733)

ATP synthase knockout causes low growth rate

atpA (b3734)

ATP synthase knockout causes low growth rate

atpH (b3735)

ATP synthase knockout causes low growth rate

atpF (b3736)

ATP synthase knockout causes low growth rate

atpE (b3737)

ATP synthase knockout causes low growth rate

atpB (b3738)

ATP synthase knockout causes low growth rate