Table 7 False negative model predictions due to misidentified experiment phenotypes or media compositions
Gene | Explanation |
|---|---|
mtn (b0159) | essential according to Choi-Rhee et al. [36] |
thiI (b0423) | possibly thiamin in media due to incomplete washing |
bioA (b0774) | possibly biotin in media due to incomplete washing |
bioB (b0775) | possibly biotin in media due to incomplete washing |
bioF (b0776) | possibly biotin in media due to incomplete washing |
bioC (b0777) | possibly biotin in media due to incomplete washing |
bioD (b0778) | possibly biotin in media due to incomplete washing |
aroD (b1693) | only experimental growth under one condition, possible error |
thiD (b2103) | essential according to Orth et al. [10] |
cysD (b2752) | only experimental growth under one condition, possible error |
argG (b3172) | only experimental growth under one condition, possible error |
cysG (b3368) | only experimental growth under one condition, possible error |
bioH (b3412) | possibly biotin in media due to incomplete washing |
ilvE (b3770) | only experimental growth under one condition, possible error |
thiH (b3990) | essential according to Orth et al. [10] |
thiG (b3991) | essential according to Orth et al. [10] |
thiF (b3992) | essential according to Orth et al. [10] |
thiE (b3993) | essential according to Orth et al. [10] |
thiC (b3994) | essential according to Orth et al. [10] |
cysQ (b4214) | MOPS is a possible alternate S source |