BMC Systems Biology

Table 1 Comparison of proposed method with BANJO and BNFinder on the yeast sub-network

From: Simultaneous learning of instantaneous and time-delayed genetic interactions using novel information theoretic scoring technique

	N=30				N=50				N=100
	Se	Sp	Pr	F	Se	Sp	Pr	F	Se	Sp	Pr	F
Proposed	0.62±	0.992±	0.57±	0.59±	0.80±	1.0±	0.79±	0.79±	0.82±	1.0±	0.76±	0.79±
Method	0.12	0.0045	0.11	0.11	0.04	0.0	0.07	0.05	0.06	0.0	0.03	0.04
BNFinder	0.53±	0.996±	0.68±	0.59±	0.62±	0.997±	0.74±	0.67±	0.69±	0.997±	0.74±	0.72±
+BDe	0.04	0.0006	0.02	0.02	0.04	0.0019	0.13	0.06	0.08	0.0007	0.06	0.07
BNFinder	0.51±	0.996±	0.63±	0.56±	0.60±	0.996±	0.68±	0.63±	0.65±	0.996±	0.69±	0.67±
+MDL	0.08	0.0006	0.07	0.08	0.05	0.0022	0.15	0.09	0.0	0.0	0.04	0.02
BANJO	0.51±	0.987±	0.49±	0.46±	0.55±	0.993±	0.57±	0.55±	0.60±	0.995±	0.61±	0.61±
	0.08	0.01	0.2	0.15	0.09	0.0049	0.23	0.16	0.08	0.0014	0.09	0.08

Back to article page

ISSN: 1752-0509

Contact us

General enquiries: ORSupport@springernature.com