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Table 4 Q-values of pathways detected by GSA for the three breast cancer datasets

From: Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases

 

Dataset 1

Dataset 2

Dataset 3

PTC1

0.0077

0.0072

0.013

Cell cycle

<0.0001

0.00027

0.0072

SRCRPTP

0.0020

0.0027

0.0043

G2 &M phase

0.0048

0.0025

0.0075

Cyclin

0.019

0.0072

0.0050

RB

0.0048

0.0030

0.0072

G2

0.0020

0.00027

0.011

SKP2E2F

0.0069

0.012

0.0070

CDC25

0.0022

0.00027

0.0075

  1. q-value < 0.01 is considered as significant.
  2. Only pathways detected by at least two datasets are listed.
  3. Dataset 1: GSE7390; Dataset 2: GSE19615; Dataset 3: GSE26639.
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BMC Systems Biology

ISSN: 1752-0509

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