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Figure 1 | BMC Systems Biology

Figure 1

From: URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries

Figure 1

The URDME framework consists of three loosely coupled layers. Solvers reside at the bottom level and are most often written in a compiled language like ANSI-C. The middle layer provides for interfaces between the solvers and the top-level mesh-generation infrastructure. Both the top- and the bottom-layer may be replaced by other software as long as the middle level is extended appropriately.

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