Table 3 Selected complexes predicted by our method-II on DIP data
From: Discovering protein complexes in protein interaction networks via exploring the weak ties effect
ID | Match | P-value | Predicted complexes | Â | Â | Function | |
|---|---|---|---|---|---|---|---|
1 | 90.5% | 5.44E-44 | YBL002W | YBR009C | YBR154C | YDL140C | DNA-directed RNA polymerase activity |
| Â | Â | Â | YDL150W | YGL070C | YJR063W | YKL144C | Â |
| Â | Â | Â | YKR025W | YNL113W | YNR003C | YOR116C | Â |
| Â | Â | Â | YOR151C | YOR207C | YOR210W | YOR224C | Â |
| Â | Â | Â | YOR341W | YPR010C | YPR110C | YPR187W | Â |
| Â | Â | Â | YPR190C | Â | Â | Â | Â |
2 | 94.4% | 8.77E-40 | YDL150W | YKL144C | YKR025W | YNL151C | RNA polymerase activity |
| Â | Â | Â | YNR003C | YOR116C | YOR207C | YPR110C | Â |
| Â | Â | Â | YBL002W | YBR154C | YDR045C | YJR063W | Â |
| Â | Â | Â | YNL113W | YOR224C | YOR341W | YPR010C | Â |
| Â | Â | Â | YPR187W YPR190C | Â | Â | Â | |
3 | 100% | 7.57E-26 | YPL138C | YDR469W | YBR175W | YHR119W | histone methyltransferase activity (H3-K4 specific) |
| Â | Â | Â | YBR258C YAR003W YKL018W YLR015W | Â | |||
4 | 88.2% | 1.49E-20 | YBL093C | YBR253W | YDR443C | YNL025C | transcription regulator activity |
| Â | Â | Â | YNL236W | YOR140W | YBR193C | YCR081W | Â |
| Â | Â | Â | YDL005C | YER022W | YGL151W | YGR104C | Â |
| Â | Â | Â | YHR041C YOL051W YOL135C YPL042C YPL248C | Â | |||
5 | 100% | 2.64E-21 | Q0085 YBL099W YDR298C YDR377W YJR121W | proton-transporting ATPase activity, rotational mechanism | |||
| Â | Â | Â | YKL016C YML081C-A YPL078C YPR020W | Â | |||