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Table 3 Selected complexes predicted by our method-II on DIP data

From: Discovering protein complexes in protein interaction networks via exploring the weak ties effect

ID

Match

P-value

Predicted complexes

  

Function

1

90.5%

5.44E-44

YBL002W

YBR009C

YBR154C

YDL140C

DNA-directed RNA polymerase activity

   

YDL150W

YGL070C

YJR063W

YKL144C

 
   

YKR025W

YNL113W

YNR003C

YOR116C

 
   

YOR151C

YOR207C

YOR210W

YOR224C

 
   

YOR341W

YPR010C

YPR110C

YPR187W

 
   

YPR190C

    

2

94.4%

8.77E-40

YDL150W

YKL144C

YKR025W

YNL151C

RNA polymerase activity

   

YNR003C

YOR116C

YOR207C

YPR110C

 
   

YBL002W

YBR154C

YDR045C

YJR063W

 
   

YNL113W

YOR224C

YOR341W

YPR010C

 
   

YPR187W YPR190C

   

3

100%

7.57E-26

YPL138C

YDR469W

YBR175W

YHR119W

histone methyltransferase activity (H3-K4 specific)

   

YBR258C YAR003W YKL018W YLR015W

 

4

88.2%

1.49E-20

YBL093C

YBR253W

YDR443C

YNL025C

transcription regulator activity

   

YNL236W

YOR140W

YBR193C

YCR081W

 
   

YDL005C

YER022W

YGL151W

YGR104C

 
   

YHR041C YOL051W YOL135C YPL042C YPL248C

 

5

100%

2.64E-21

Q0085 YBL099W YDR298C YDR377W YJR121W

proton-transporting ATPase activity, rotational mechanism

   

YKL016C YML081C-A YPL078C YPR020W