|
M. musculus
|
TCA cycle pathway
|
KEGG vs WikiPathways
|
KEGG vs MouseCyc
|
MouseCyc vs WikiPathways
|
|---|
|
Gene
|
Count
|
31 vs 30
|
31 vs 13
|
13 vs 30
|
| |
Overlap
|
24
|
13
|
11
|
| |
Jaccard Coefficient
|
0.65
|
0.42
|
0.34
|
|
Gene Pair
|
Count
|
100 vs 30
|
100 vs 24
|
24 vs 30
|
| |
Overlap
|
10
|
9
|
7
|
| |
Jaccard Coefficient
|
0.083
|
0.078
|
0.149
|
|
H.
sapiens
|
Fatty Acid Biosynthesis
|
KEGG vs WikiPathways
|
KEGG vs HumanCyc
|
HumanCyc vs WikiPathways
|
|
Gene
|
Count
|
6 vs 22
|
6 vs 2
|
2 vs 22
|
| |
Overlap
|
3
|
2
|
1
|
| |
Jaccard Coefficient
|
0.12
|
0.33
|
0.04
|
|
Gene Pair
|
Count
|
12 vs 29
|
12 vs 2
|
2 vs 29
|
| |
Overlap
|
1
|
1
|
0
|
| |
Jaccard Coefficient
|
0.025
|
0.077
|
0.0
|
|
M
.
t
uberculosis
H37Rv
|
TCA cycle pathway
|
KEGG vs WikiPathways
|
KEGG vs MTBRvCyc
|
MTBRvCyc vs WikiPathways
|
|
Gene
|
Count
|
35 vs 34
|
35 vs 10
|
10 vs 34
|
| |
Overlap
|
34
|
10
|
10
|
| |
Jaccard Coefficient
|
0.97
|
0.29
|
0.29
|
|
Gene Pair
|
Count
|
107 vs 37
|
107 vs 19
|
19 vs 37
|
| |
Overlap
|
3
|
9
|
5
|
| |
Jaccard Coefficient
|
0.021
|
0.077
|
0.098
|
- This table shows the calculation of gene/gene pair differences and overlap between the different source databases for the same chosen pathways.
