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Table 2 Comparison of RS

From: Solving gap metabolites and blocked reactions in genome-scale models: application to the metabolic network of Blattabacterium cuenoti

No. reactions in RS

iMP240

iCG238

J1.0

J.75

2

27

28

21

--

3

8

6

3

1 (+1)

4

2

4

1

--

5

4

3

2

--

6

3

3

2

--

7

3

1

1

1 (+1)

8

--

1

--

--

9

4

3

3

--

10

1

1

--

1 (+1)

11

--

1

--

--

13

1

--

--

--

17

--

1

--

--

18

1

--

--

1 (-1)

20

1

--

--

--

  1. The first column indicates the number of reactions that belong to a RS. The second and third columns indicate how many RS with a given number of reaction are in model iMP240 and iCG238, respectively. The fourth column shows how many RS pairs are equal in both models and for a given number of reactions. In the last columns, the number out of the parenthesis indicate how many RS with a Jaccard index greater than 0.75 have been found, taking as the reference point the model iMP240. The number in parenthesis indicates the difference of reactions between a pair of RS in the following way: a positive number means that the RS in iCG238 has this number of additional reactions whereas a negative indicate the opposite.