A novel function prediction approach using protein overlap networks

BMC Systems Biology

Table 1 Network properties of the main sub-graphs of four investigated genomes

	No. of proteins	No. of domains	No. of GO terms	Mean value
	No. of proteins	No. of domains	No. of GO terms	Degree	Path length	Clustering coefficient
Yeast	762	237	146	38.4	5.65	0.94
Fly	6,099	915	385	101.9	4.52	0.93
Worm	7,742	745	343	121.3	5.02	0.95
Human	25,455	1,478	551	312.5	4.14	0.92

The mean value was calculated for the degree and clustering coefficient of all nodes and the shortest path length between any two nodes in the network.

ISSN: 1752-0509