Table 2 Yeast-human alignment results
From: Corbi: a new R package for biological network alignment and querying
Method | MI-GRAAL | CNetQ | CNetA | BLASTQ | BLASTA |
|---|---|---|---|---|---|
MP | 2390 | 1029 | 1694 | 1297 | 1672 |
EC | 20.52% | 15.29% | 9.25% | 4.81% | 6.52% |
LCCS | 1870(2940) | 205(956) | 116(376) | 47(141) | 55(172) |
GO coverage (depth ≥ 3) | |||||
MF | 12.70% | 47.78% | 54.61% | 55.07% | 56.43% |
BP | 9.91% | 52.01% | 53.97% | 58.55% | 58.10% |
CC | 44.17% | 72.20% | 72.73% | 76.33% | 74.74% |
KEGG analysis | |||||
OP | 24 | 331 | 556 | 583 | 719 |
HP | 9 | 26 | 27 | 27 | 27 |
PAC | 9.961% | 21.80% | 32.35% | 31.66% | 35.06% |