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Table 1 Detailed information of each PS-specific model

From: Identification of novel motif patterns to decipher the promoter architecture of co-expressed genes in Arabidopsis thaliana

Models Gene Sets Motif Predictions Accuracy
(%)
Genes predicted genome-wide
  motif-prediction model-build overall* over-represented§   
Flower 55 83 142 6 75.8 49/ 63
Seed 59 88 183 3 69.0 134/ 165
Root 64 95 171 5 65.2 34/ 48
Shoot 62 92 142 4 60.2 51/ 95
Whole Plant 58 87 141 2 64.1 76/ 86
  1. Notes
  2. and columns indicate the number of genes in the "motif-prediction" and "model-build" sets
  3. * column shows the number of motifs predicted by the three motif-discovery programs
  4. § column indicates the amount of over-represented motifs per model
  5. column shows the accuracy achieved by the corresponding SVMs
  6. column depicts the amount of genes predicted genome-wide