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Figure 6 | BMC Systems Biology

Figure 6

From: A genome-wide MeSH-based literature mining system predicts implicit gene-to-gene relationships and networks

Figure 6

Analysis of the term “Neutrophil Activation” from the GenoMesh MeSHBrowse website. After browsing the MeSH hierarchical tree from “Phenomena and Processes” → “Immune System Phenomena” → “Immune System Processes” → “Neutrophil Activation”, 23 E. coli genes were found to be associated with the MeSH term “Neutrophil Activation". The related genes and gene pairs were then provided next to the hierarchical tree. Furthermore, a network of these 23 E. coli genes was automatically generated (note: the network image will only be generated if the gene number is less than 100). The gray or red-colored edges represent respectively interactions or predicted interactions. The GenoMesh annotation of the gene pair ytjC and yjhR is provided when a user moves the mouse cursor over the red line (edge) linking these two genes. A click on this link would lead the page to a detailed analysis of the gene pair (not shown).

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