Table 5 Comparison of the functional enrichment of protein complexes identified by LF-PIN and other algorithms (for E.coli)
From: Identifying protein complexes based on density and modularity in protein-protein interaction network
Algorithms | [E-10,E-5] | [E-5, 0.01] | ≥0.01 insignificant | <0.01 significant |
|---|---|---|---|---|
LF-PIN | 11(7.6%) | 23(16.0%) | 110(76.4%) | 34(23.6%) |
CMC | 13(2.9%) | 46(10.2%) | 391(86.9%) | 59(13.1%) |
CPM | 4(6.3%) | 6(9.5%) | 53(84.1%) | 10(15.9%) |
DPClus | 11(7.6%) | 51(10.8%) | 410(87.0%) | 61(13.0%) |
HC-PIN | 6(2.1%) | 12(8.3%) | 122(84.1%) | 23(15.9%) |
MCL | 7(1.2%) | 51(8.9%) | 515(89.9%) | 58(10.1%) |
NFC | 10(2.1%) | 41(14.3%) | 240(83.6%) | 47(16.4%) |