Table 1 Genes with SMAD-dependent trajectories identified by CADBIOM
From: An integrative modeling framework reveals plasticity of TGF-β signaling
PID ID | HUGO ID | Description |
|---|---|---|
COX_2* | PTGS2 | Prostaglandin-endoperoxide synthase 2 |
DAPK1 * | DAPK1 | Death-associated protein kinase 1 |
GSC | GSC | Goosecoid homeobox |
ID1 | ID1 | Inhibitor of DNA binding 1 |
IFNB | IFNB1 | Interferon, beta 1 |
IgA1 | IGHA1 | Immunoglobulin heavy constant alpha 1 |
IL10 | IL10 | Interleukin 10 |
IL5* | IL5 | Interleukin 5 (colony-stimulating factor, eosinophil) |
JUN* | JUN | Jun oncogene |
KLK2 | KLK2 | Kallikrein-related peptidase 2 |
Laminin gamma1 | LAMC1 | Laminin, gamma 1 |
MEF2C | MEF2C | Myocyte enhancer factor 2C |
NOS2* | NOS2 | Nitric oxide synthase 2, inducible |
p15INK4b | CDKN2B | Cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) |
p21CIP1 | CDKN1A | Cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
RAB7 | RAB7A | RAB7A, member RAS oncogene family |
SMAD7 | SMAD7 | SMAD family member 7 |
SNAI1 | SNAI1 | Snail homolog 1 (Drosophila) |
SOCS3 | SOCS3 | Suppressor of cytokine signaling 3 |
TCF3 | TCF3 | Transcription factor 3 |
TLX2 | TLX2 | T-cell leukemia homeobox 2 |
TRPC6 | TRPC6 | Transient receptor potential cation channel, subfamily C, member 6 |
TRPV1 | TRPV1 | Transient receptor potential cation channel, subfamily V, member 1 |