Table 3 Sub networks of the E.coli MN
From: Comparison on extreme pathways reveals nature of different biological processes
# Sub network | Name | Containing subsystems | No. of reactions |
|---|---|---|---|
1 | A mino acid, C arbohydrat and L ipid metabolism (sACL) | Alanine and Aspartate Metabolism, Cysteine Metabolism, Folate Metabolism, Glutamate Metabolism, Glycine and Serine Metabolism, Histidine Metabolism, Methionine Metabolism, Threonine and Lysine Metabolism, Tyrosine Tryptophan and Phenylalanine Metabolism, Valine Leucine and Isoleucine Metabolism, Arginine and Proline Metabolism, Citric Acid Cycle, Pentose Phosphate Pathway, Pyruvate Metabolism, Glyoxylate Metabolism, Methylglyoxal Metabolism, Glycolysis and Gluconeogenesis, Oxidative Phosphorylation, Glycerophospholipid Metabolism, Anaplerotic Reactions | 741 |
2 | Nitrogen and Nucleotide metabolism | Cofactor and Prosthetic Group Biosynthesis, Nitrogen Metabolism, Nucleotide Salvage Pathway, Purine and Pyrimidine Biosynthesis, tRNA Charging | 445 |
3 | M embrane and M urein metabolism (sMM) | Cell Envelope Biosynthesis, Lipopolysaccharide Biosynthesis Recycling, Membrane Lipid Metabolism, Murein Biosynthesis, Murein Recycling | 358 |
4 | Transport | Transport Inner Membrane,Transport Outer Membrane,Transport Outer Membrane Porin | 849 |
5 | Others | Alternate Carbon Metabolism; Inorganic Ion Transport and Metabolism; Unassigned | 408 |
6 | Exchange | Exchange reactions | 304 |