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Table 5 t-tests of microarray measurements between genotype and DNA methylation for blood, normal and tumor tissues.

From: Genes associated with genotype-specific DNA methylation in squamous cell carcinoma as candidate drug targets

Nsp
  Genotype DNA methylation P- value
blood 1.32 1.19 3.1 × 10 12
normal tissue 2.45 1.75
tumor 2.84 2.23
Sty1
  Genotype DNA methylation P- value
blood 2.21 1.77
normal tissue 2.58 2.14
tumor 2.87 2.48
Sty2
  Genotype DNA methylation P- value
blood 1.69 1.29
normal tissue 2.42 2.02
tumor 2.51 2.04
  1. Nsp and Sty are the microarray data sets used in the study. Sty1 and Sty2 correspond to the PC4 for genotype (Figures 4d and 6b)/PC3 for DNA methylation (Figures 5c and 6c) and PC3 for genotype (Figures 4c and 6a)/PC4 for DNA methylation (Figures 5d and 6d) combinations of PCs. indicates P-values < 2.2 x 10−16.