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Table 4 Performance comparison of different clique_sizes and merg_threds

From: Predicting protein complex in protein interaction network - a supervised learning based method

 

Clique_size ≥ 4

Clique_size ≥ 3

merg_

thred

Num

P

R

F

Num

P

R

F

0.1

96

0.7813

0.2635

0.3941

212

0.6792

0.4102

0.5115

0.2

113

0.7876

0.2934

0.4275

286

0.6434

0.4746

0.5462

0.3

125

0.76

0.3009

0.4311

333

0.6186

0.4895

0.5465

0.4

142

0.7465

0.3084

0.4365

388

0.6237

0.5075

0.5596

0.5

171

0.7427

0.3129

0.4403

491

0.6273

0.5240

0.5710

0.6

203

0.7340

0.3159

0.4417

624

0.6298

0.5284

0.5747

0.7

248

0.7540

0.3189

0.4482

755

0.6530

0.5374

0.5896

0.8

303

0.7294

0.3234

0.4481

880

0.6477

0.5434

0.5910

0.9

368

0.6440

0.3249

0.4319

945

0.6180

0.5434

0.5783

  1. Num denotes the number of the predicted complex, P the precision, R the recall and F the F-measure.