Skip to main content

Table 1 Contributions of features.

From: A graph kernel method for DNA-binding site prediction

Features PSSM1 E_P2 Ent3 StrCn4 rASA5 Cur6 Poc7 All8
Accuracy (%) 86.9 77.0 67.5 54.7 54.5 54.1 54.1 88.7
  1. 1 PSSM: position-specific scoring matrix; 2 E_P: electrostatic potential; 3 Ent: sequence entropy; 4 StrCn: structural conservation; 5 rASA: relative solvent accessibility; 6 Cur: surface curvature; 7 Poc: size of the pocket where the residue is located; and 8 All: all the seven attributes were used.