Figure 6

Comparison of six regulatory similarities on three applications. The x-axis is the neighborhood size of the regulatory neighborhood (RN) while the y-axis is the degree of (top) gene co-function calculated using the functional enrichment score (FES), (middle) gene co-expression calculated using the co-expression score (CES) and (bottom) protein-protein interactions using the interaction enrichment score (IES) of the RN identified by the RS measure.