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Figure 3 | BMC Systems Biology

Figure 3

From: Proteomics-based metabolic modeling and characterization of the cellulolytic bacterium Thermobifida fusca

Figure 3

Flowchart of the model building step and data incorporation for all the three version of the model. Genomics and Proteomics are the high throughput datasets used for building the models. SUR – Substrate uptake rate for cellobiose as calculated experimentally was applied as a constraint. Red indicated no solution was obtained when running simulation of SEED model under experimental constraints. Values in the green boxes indicate the growth rates for Tvu_v2 and Tfu_v3.

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