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Table 3 Generating EFMs with different valine yield intervals

From: A depth-first search algorithm to compute elementary flux modes by linear programming

Cutoff

Yield interval

Number of EFMs

tCPU (s)

99%

≥ 0.85

24

29,195

75%

[0.64, 0.85]

2,472

220,448

50%

[0.43, 0.64]

59,580

2,645,744

25%

[0.22, 0.43]

21,636

5,900,579

0%

≥ 0

2,712,435

24,297,990

  1. EFMs were generated for model aantpe using CPLEX solver. The theoretical yields range from 0.004 to 0.8571 mol valine per mol glucose.
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BMC Systems Biology

ISSN: 1752-0509

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