Table 2 KEGG and GO pathways of top 10 Cytoscape modules in 1×IMO network
| Â | Sub-network motif 1 | Sub-network motif 2 | Sub-network motif 3 | Sub-network motif 4 | Sub-network motif 5 |
|---|---|---|---|---|---|
KEGG pathway | Cell cycle | Cell cycle | Cell cycle | Cytokine-cytokine receptor interaction | Complement and coagulation cascades |
MAPK signaling pathway | Apoptosis | TGF-beta signaling pathway | Cytokine-cytokine receptor interaction | Pentose and glucuronate interconversions | |
Focal adhesion | MAPK signaling pathway | MAPK signaling pathway | Jak-STAT signaling pathway | Galactose metabolism | |
Apoptosis | Focal adhesion | Wnt signaling pathway | MAPK signaling pathway | Citrate cycle (TCA cycle) | |
GO pathway | Cell cycle | Cell proliferation | Regulation of cell cycle | Response to biotic stimulus | Glycolysis |
Cell proliferation | Cell cycle | Cell cycle | Immune response | Exose catabolism | |
Modification-dependent protein catabolism | Regulation of cell cycle | Cell proliferation | Defense response | Alcohol catabolism | |
Ubiquitin-dependent protein catabolism | DNA-dependent DNA replication | Transcription, DNA-dependent | Organismal physiological process | Monosaccharide catabolism | |
| Â | Sub-network motif 6 | Sub-network motif 7 | Sub-network motif 8 | Sub-network motif 9 | Sub-network motif 10 |
KEGG pathway | Cytokine-cytokine receptor interaction | Cytokine-cytokine receptor interaction | Cytokine-cytokine receptor interaction | MAPK signaling pathway | MAPK signaling pathway |
Cytokine-cytokine receptor interaction | ECM-receptor interaction | MAPK signaling pathway | MAPK signaling pathway | MAPK signaling pathway | |
MAPK signaling pathway | Porphyrin and chlorophyll metabolism | Jak-STAT signaling pathway | MAPK signaling pathway | Toll-like receptor signaling pathway | |
Jak-STAT signaling pathway | Â | MAPK signaling pathway | Apoptosis | MAPK signaling pathway | |
GO pathway | Response to biotic stimulus | Transition metal ion transport | Response to biotic stimulus | Response to biotic stimulus | Protien amino acid phosphorylation |
Immune response | Di-, tri-valent inorganic cation transport | Immune response | Immune response | Morphogenesis | |
Defense response | Metal ion transport | Defense response | Defense response | Phosphorylation | |
Response to stress | Â | Organismal physiological process | Response to stress | Protein kinase cascade |