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Fig. 1 | BMC Systems Biology

Fig. 1

From: Genome-scale metabolic model of Rhodococcus jostii RHA1 (iMT1174) to study the accumulation of storage compounds during nitrogen-limited condition

Fig. 1

Simplified possible pathways of storage metabolism in R. jostii RHA1 for the three main storage compounds: glycogen, PHA, and TAG. glc-D: alpha-D-Glucose, adpglc: ADP-glucose, g1p: D-Glucose 1-phosphate, g6p: alpha-D-Glucose 6-phosphate, g3p: D-Glyceraldehyde 3-phosphate, pyr: Pyruvate, 2acl: 2-Acetolactate, 23dh3mb: 2,3-Dihydroxy-3-methylbutanoate, 3mob: 3-Methyl-2-oxobutanoic acid, val-L: L-Valine, smms: (S)-Methylmalonatesemialdehyde, accoa: Acetyl-CoA, oaa: Oxaloacetate, TCA: Tricarboxylic acid cycle, succoa: Succinyl-CoA, mmcoa-R: (R)-Methylmalonyl-CoA, mmcoa-S: (S)-Methylmalonyl-CoA, ppcoa: Propanoyl-CoA, 3kvcoa: 3-Ketovaleryl-CoA, r3hvcoa: (R)-3-Hydroxyvaleryl-CoA, PHB: Poly-β-hydroxybutyrate, PHV: Poly-3-hydroxyvalerate, PHA: Poly-β-hydroxyalkanoate, 3hbcoa: (S)-3-Hydroxybutanoyl-CoA, aacoa: Acetoacetyl-CoA, ac: Acetate, acac: Acetoacetate, TAG: Triacylglycerol, glyc3p: Glycerol 3-phosphate, acylACP: Acyl-[acyl-carrier-protein], actACP: Acetoacetyl-ACP, malACP: Malonyl-[acyl-carrier protein], acACP: Acetyl-[acyl-carrier-protein]

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BMC Systems Biology

ISSN: 1752-0509

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