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Table 1 Summary table of correlation data for the 60 proteomes examined

From: The organization of domains in proteins obeys Menzerath-Altmann’s law of language

No Kingdom Genus/Species G.a. Total proteins Selected proteins % data selected Slope (b) (± SE) Intercept (A) (± SE) R2 Genome size (kb) L* L e F-value p-value
1 Metazoa Homo sapiens hs 30610 30516 99.69 –0.354 (± 0.055) 199.555 (± 14.935) 0.91 3080436 522 286 106.83 <0.0001
2 Metazoa Apis mellifera ai 15858 15708 99.05 –0.308 (± 0.061) 212.979 (± 16.299) 0.91 200000 467 281 85.95 <0.0001
3 Metazoa Branchiostoma floridae bf 33445 33346 99.7 –0.404 (± 0.075) 197.516 (± 21.842) 0.91 480405 505 267 181.82 <0.0001
4 Metazoa Caenorhabditis elegans cl 14297 14224 99.49 –0.351 (± 0.037) 224.737 (± 6.234) 0.93 100272 530 286 116.85 <0.0001
5 Metazoa Danio rerio da 23072 22978 99.59 –0.374 (± 0.071) 206.682 (± 17.610) 0.92 1700000 504 285 147.17 <0.0001
6 Metazoa Gallus gallus gg 14376 14302 99.49 –0.304 (± 0.027) 203.088 (± 6.813) 0.95 1000000 573 295 251.53 <0.0001
7 Metazoa Lottia gigantea gy 12223 12162 99.5 –0.345 (± 0.087) 198.757 (± 20.942) 0.93 359500 441 253 143.64 <0.0001
8 Metazoa Ciona intestinalis is 11913 11773 98.82 –0.336 (± 0.051) 215.482 (± 12.309) 0.92 116700 497 285 78.86 <0.0001
9 Metazoa Xenopus laevis xl 23167 23151 99.93 –0.324 (± 0.020) 196.487 (± 4.213) 0.9 205432 456 262 100.49 <0.0001
10 Metazoa Daphnia pulex d7 11750 11705 99.62 –0.252 (± 0.045) 191.214 (± 9.103) 0.92 197300 437 242 100.8 <0.0001
11 Plants Arabidopsis thaliana at 15858 15856 99.99 –0.256 (± 0.067) 215.928 (± 12.090) 0.92 119707 470 271 68.11 0.0002
12 Plants Carica papaya r6 12095 12091 99.97 –0.149 (± 0.030) 190.871 (± 1.098) 0.9 271733 401 236 36.23 0.0038
13 Plants Chlamydomonas reinhardtii cy 7132 7073 99.17 –0.156 (± 0.059) 192.702 (± 8.648) 0.89 100000 581 234 16.59 0.0553
14 Plants Chlorella sp h2 6153 6147 99.9 –0.205 (± 0.034) 200.449 (± 5.810) 0.9 40000 473 248 45.33 0.0011
15 Plants Cyanidioschyzon merolae ya 3152 3127 99.21 –0.255 (± 0.041) 225.731 (± 7.531) 0.99 16520 525 281 158.93 0.0062
16 Plants Medicago truncatula mw 15858 14899 93.95 –0.045 (± 0.018) 183.279 (± 2.804) 0.97 500000 410 225 103.26 0.002
17 Plants Oryza sativa os 15858 15773 99.46 –0.121 (± 0.056) 206.214 (± 9.984) 0.85 420000 579 284 11.46 0.0773
18 Plants Physcomitrella patens pw 13310 13280 99.77 –0.178 (± 0.065) 205.616 (± 10.894) 0.93 453929 441 261 38.61 0.0084
19 Plants Vitis vinifera vt 17268 17241 99.84 –0.124 (± 0.035) 210.018 (± 5.922) 0.93 504600 461 274 38.68 0.0084
20 Plants Populus trichocarpa pt 15858 15857 99.99 –0.113 (± 0.027) 194.256 (± 1.770) 0.83 550000 454 244 24.91 0.0041
21 Fungi Ashbya gossypii go 2908 2897 99.62 –0.257 (± 0.061) 233.156 (± 14.176) 0.98 9200 532 293 136.05 0.0014
22 Fungi Candida glabrata gl 3155 3143 99.62 –0.267 (± 0.094) 235.165 (± 20.535) 0.92 12280 548 296 34.59 0.0098
23 Fungi Kluyveromyces waltii kw 3106 3094 99.61 –0.257 (± 0.153) 230.109 (± 28.805) 0.93 11000 509 286 37.22 0.0088
24 Fungi Laccaria bicolor lo 7148 7133 99.79 –0.164 (± 0.040) 208.118 (± 7.009) 0.95 58683 469 255 52.15 0.0055
25 Fungi Neurospora crassa ns 4745 4723 99.54 –0.271 (± 0.126) 239.997 (± 26.390) 0.93 37097 586 297 38.55 0.0084
26 Fungi Saccharomyces cerevisiae xs 3517 3503 99.6 –0.251 (± 0.065) 233.237 (± 13.702) 0.93 12069 556 295 41.92 0.0075
27 Fungi Aspergillus nidulans an 6335 6255 98.74 –0.288 (± 0.153) 247.290 (± 30.285) 0.93 30166 542 300 25.92 0.0365
28 Fungi Chaetomium globosum hg 5692 5647 99.21 –0.223 (± 0.058) 230.690 (± 11.844) 0.98 34336 594 290 137.78 0.0013
29 Fungi Coprinopsis cinerea or 6143 6138 99.92 –0.176 (± 0.072) 219.845 (± 16.101) 0.92 37500 559 280 54.21 0.0007
30 Fungi Phanerochaete chrysosporium fc 5688 5646 99.26 –0.265 (± 0.166) 232.617 (± 29.379) 0.9 30000 485 279 17.14 0.0537
31 Protista Aureococcus anophagefferens a6 7871 7664 97.37 –0.159 (± 0.067) 201.023 (± 10.281) 0.96 32000 543 245 22.34 0.1327
32 Protista Dictyostelium discoideum dt 6643 6597 99.31 –0.251 (± 0.098) 227.656 (± 20.211) 0.95 34000 295 73.82 0.001
33 Protista Giardia lamblia gf 2426 2348 96.78 –0.119 (± 0.005) 221.790 (± 0.882) 1 1192 630 279 2714.7 0.0122
34 Protista Monosiga brevicollis ov 5777 5691 98.51 –0.238 (± 0.052) 214.210 (± 10.717) 0.98 38648 284 147.68 0.0012
35 Protista Naegleria gruberi eb 8619 8607 99.86 –0.201 (± 0.129) 216.458 (± 23.734) 0.87 36000 543 268 19.87 0.021
36 Protista Paramecium tetraurelia ir 15858 15773 99.46 –0.213 (± 0.093) 208.394 (± 17.651) 0.9 200000 550 265 28.29 0.013
37 Protista Phaeodactylum tricornutum hr 5800 5784 99.72 –0.207 (± 0.095) 211.022 (± 16.193) 0.87 2753 255 20.58 0.0201
38 Protista Tetrahymena thermophila hy 11268 11174 99.17 –0.223 (± 0.120) 228.480 (± 27.268) 0.91 103927 825 303 39.97 0.0032
39 Protista Thalassiosira pseudonana tl 6238 6230 99.87 –0.184 (± 0.104) 206.013 (± 17.869) 0.86 25000 259 24.58 0.0077
40 Protista Bigelowiella natans bn 490 486 99.18 –0.210 (± 0.084) 207.501 (± 18.090) 0.89 91405.9 337 294 25.29 0.0152
41 Archaea Archaeoglobus fulgidus af 1573 1571 99.87 –0.239 (± 0.028) 200.756 (± 3.756) 0.96 2178 301 250 65.32 0.004
42 Archaea Candidatus Methanoregula 3p 1549 1548 99.94 –0.245 (± 0.042) 199.534 (± 11.096) 0.94 2542 332 259 115.37 <0.0001
43 Archaea Halobacterium salinarum 8 m 1284 1283 99.92 –0.314 (± 0.056) 213.881 (± 10.952) 0.98 2000 325 262 147.93 0.0012
44 Archaea Hyperthermus butylicus 5 m 983 977 99.39 –0.180 (± 0.031) 197.889 (± 4.878) 0.99 1667 309 238 187.21 0.0464
45 Archaea Methanocorpusculum labreanum 4 l 1128 1121 99.38 –0.304 (± 0.040) 211.796 (± 5.493) 0.92 1804 322 255 21.71 0.0431
46 Archaea Natronomonas pharaonis np 1553 1552 99.94 –0.291 (± 0.021) 213.048 (± 3.713) 0.97 2595 335 269 173.4 <.0001
47 Archaea Picrophilus torridus p3 1074 1071 99.72 –0.374 (± 0.177) 232.033 (± 30.236) 0.96 1549 332 273 51.29 0.0189
48 Archaea Pyrococcus abyssi pb 1229 1226 99.76 –0.226 (± 0.041) 209.505 (± 8.813) 0.96 1765 316 258 78.21 0.003
49 Archaea Staphylothermus marinus 0e 932 932 100 –0.232 (± 0.015) 210.751 (± 1.085) 0.91 1570 324 258 28.65 0.0128
50 Archaea Sulfolobus acidocaldarius za 1391 1391 100 –0.270 (± 0.043) 221.013 (± 7.876) 0.97 2225 316 267 98.46 0.0022
51 Bacteria Acidobacteria bacterium a3 3063 3061 99.93 –0.269 (± 0.033) 221.631 (± 12.549) 0.97 5001 384 287 202.13 <0.0001
52 Bacteria Cytophaga hutchinsonii 37 2172 2171 99.95 –0.263 (± 0.010) 217.536 (± 1.671) 0.99 4433 399 279 572.32 <0.0001
53 Bacteria Roseiflexus castenholzii 77 2981 2972 99.7 –0.289 (± 0.104) 229.016 (± 23.424) 0.95 5723 392 289 78.58 0.0009
54 Bacteria Leuconostoc mesenteroides 2 s 1317 1314 99.77 –0.291 (± 0.070) 224.144 (± 13.480) 0.96 2038 337 281 63.78 0.0041
55 Bacteria Paracoccus denitrificans 27 2893 2889 99.86 –0.331 (± 0.182) 226.498 (± 34.921) 0.91 4582 344 278 51.58 0.0008
56 Bacteria Polynucleobacter sp 0 s 1469 1469 100 –0.282 (± 0.055) 222.263 (± 18.110) 0.9 2159 350 286 54.08 0.0003
57 Bacteria Syntrophobacter fumaroxidans 0 l 2674 2674 100 –0.272 (± 0.032) 219.074 (± 8.425) 0.95 4990 376 288 117.56 <0.0001
58 Bacteria Arcobacter butzleri 6 k 1544 1538 99.61 –0.325 (± 0.118) 219.041 (± 22.723) 0.95 2341 354 268 57.99 0.0047
59 Bacteria Psychrobacter arcticus ri 1447 1442 99.65 –0.246 (± 0.097) 216.765 (± 19.062) 0.9 2650 361 281 36.05 0.0039
60 Bacteria Petrotoga mobilis 6y 1330 1328 99.85 –0.319 (± 0.127) 234.956 (± 26.153) 0.96 2169 361 296 68.67 0.0037
  1. G.a. Two-letter genome abbreviation, L Average protein length, L e Effective protein length (sum of domain lengths)
  2. *Missing average protein length information is indicated with a line