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Table 1 Gene, putative function, CAZy family, induction substrates and significant signal peptide predictions (SignalP 4.0 Server) of major carbohydrate active enzymes transcripts are shown

From: Deciphering the signaling mechanisms of the plant cell wall degradation machinery in Aspergillus oryzae

Gene Function CAZy Induction substrates SignalP D score
Cellulase
 AO090701000185 Endoglucanase A GH-12 O-CHE (↓), O-X3G4R (↓), SOP (↓), TYR (↓), O-MHE (↓) 0.604
 AO090001000348 Cellobiohydrolase C (CelC) GH-7 O-CHE (↑), O-X3G4R (↑), O-BGHEXA (↑), O-AHP (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.661
 AO090038000439 Cellobiohydrolase GH-6 O-CHE (↑), O-GMH (↑), O-XPE (↑), SOP (↑) 0.126a
 AO090001000266 β-glucosidase GH-3 O-CHE (↓), O-X3G4R (↓), SOP (↓), TYR (↓) 0.696
 AO090001000544 β-glucosidase GH-3 O-MHE (↑) 0.678
 AO090701000274 β-glucosidase GH-3 TYR (↑) 0.865
 AO090023000056 Polysacch. monooxygenase GH-61b O-CHE (↑), O-X3G4R (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.898
 AO090103000087 Polysacch. monooxygenase GH-61b, CBM-1 O-CHE (↓), SOP (↓) 0.737
 AO090012000090 Polysacch. monooxygenase GH-61b SOP (↓) 0.653
 AO090102000058 Cellobiose dehydrogenase AA-3 O-CHE (↑), O-X3G4R (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.819
 AO090003000346 Aldonolactonase - O-CHE (↑), O-X3G4R (↑), O-BGHEXA (↑), O-AHP (↑), SOP (↑) 0.838
Hemicellulase
Xylan
 AO090026000103 endo-1,4-β-xylanase GH-11 O-CHE (↓), SOP (↓), O-MHE (↓) 0.874
 AO090005000698 β-xylosidase (XylB) GH-43 O-X3G4R (↑), O-XPE (↑) 0.106
 AO090003000239 xylosidase/arabinosidase or endo-1,4-β-xylanase D GH-43 O-CHE (↑), O-X3G4R (↑), O-AHP (↑), O-GM3 (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.829
 AO090001000207 Feruloyl esterase (FAEA) - O-CHE (↑), O-BGHEXA (↑), SOP (↑) 0.748
 AO090020000508 Acetyl xylan esterase CE-3 O-BGHEXA (↑), O-GMH (↑) 0.449
 AO090701000315 Acetyl esterase CE-16 O-CHE (↑), O-X3G4R (↑), O-BGHEXA (↑), O-GMH (↑), O-XPE (↑), O-AHP (↑), O-GM3 (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.677
 AO090701000885 α-L-arabinofuranosidase (axhA) GH-62 O-CHE (↑), O-X3G4R (↑), O-BGHEXA (↑), SOP (↑) 0.719
 AO090701000838 α-L-arabinofuranosidase GH-43 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), O-GMH (↑), O-AHP (↑), O-GM3 (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.895
 AO090012000445 β-galactosidase (LacA) GH-35 O-CHE (↑), O-X3G4R (↑), O-GMH (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.713
 AO090023000053 β-galactosidase or α-L-arabinofuranosidase B GH-2 O-CHE (↑), O-X3G4R (↑), SOP (↑), O-MHE (↑) 0.456
Galacto(gluco)mannan
 AO090003001410 β-mannosidase GH-2 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), O-AHP (↑), O-GMH (↑), O-AHP (↑), SOP (↑), O-MHE (↑) 0.675
 AO090001000556 β-mannosidase GH-2 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), O-AHP (↑), SOP (↑), TYR (↑) 0.492
 AO090003001305 α-galactosidase GH-27 O-CHE (↑), O-GM3 (↑) 0.597
Pectic polysaccharides
 AO090026000252 Rhamnogalacturonase GH-28 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), SOP (↑), O-MHE (↑) 0.82
 AO090003001268 Rhamnogalacturonan acetylesterase CE-12 O-CHE (↑) 0.804
 AO090005001400 Exo-polygalacturonase GH-28 O-CHE (↑) 0.858
 AO090023000161 polygalacturonase GH-28 O-CHE (↓),O-X3G4R (↓), SOP (↓) 0.531
 AO090138000086 endo-polygalacturonase GH-28 O-CHE (↑), O-X3G4R (↑), O-BGHEXA (↑), SOP (↑), O-MHE (↑) 0.763
 AO090003001017 exo-α-L-1,5-arabinanase GH-93 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), O-AHP (↑), O-GM3 (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.825
 AO090026000804 endo-arabinase GH-43 O-CHE (↑), O-X3G4R (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.81
Other hydrolases
 AO090103000218 Chitinase GH-18 O-CHE (↓) 0.797
 AO090005000029 cutinase (PDB: 3GBS) CE-5 O-CHE (↑),O-X3G4R (↑), O-AHP (↑), SOP (↑), O-MHE (↑) 0.574
 AO090011000665 Cutinase CE-5 O-CHE (↑),O-X3G4R (↑), O-BGHEXA (↑), SOP (↑), TYR (↑), O-MHE (↑) 0.769
 AO090023000058 Cutinase CE-5 TYR (↑) 0.614
  1. Regulation is indicated by arrows
  2. aD-score 0.725 when MHTLNMQALVALSPLLFSAATA is considered as signal peptide omitting 87 residues from the N-terminal
  3. bReclassified recently in CAZy database as AA-9 [25]