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Table 3 Composition of the four clusters obtained using the BM model

From: Modelling the influence of dimerisation sequence dissimilarities on the auxin signalling network

\(C1^{\text {ARF+}}_{\texttt {BM}}\)

ARF5 (0.19), ARF19 (0.212), ARF8, ARF7, ARF6 (0.258), IAA5 (0.299), ARF9, IAA9, IAA34

\(C2^{\text {ARF-}}_{\texttt {BM}}\)

ARF14 (0.087), ARF1 (0.096), ARF13, ARF16 (0.115), IAA6, ARF4, ARF10, ARF18, ARF2 (0.137), ARF12 (0.154), ARF20 (0.189)

\(C3^{\text {IAA}}_{\texttt {BM}}\)

IAA3 (0.198), IAA8 (0.205), IAA4 (0.222), IAA2, IAA18, IAA1, IAA16, IAA28 (0.25), IAA15 (0.261), IAA10, IAA12, IAA13, IAA27, IAA19 (0.284),

 

IAA14 (0.296), IAA17, IAA20 (0.307), IAA30 (0.33), IAA7

\(C4^{\text {Outlier}}_{\texttt {BM}}\)

IAA11 (0.333), ARF22 (0.337), IAA26, IAA29 (0.348), IAA33 (0.377), IAA32, IAA31 (0.435)

  1. The ARF activators are in bold. The distance D(i, q) between protein i and cluster q to which it is assigned is given for the most central, the most peripheral and some other proteins of interest for interpretation