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Table 3 Validation rates for the three protocols—our protocol EP-DNN and the two recent algorithms that define the state-of-the-art, DEEP-EN and RFECS, where we keep the number of enhancer predictions approximately constant, at 100,000

From: Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions

H1 Prediction # of Predictions Validation rate (%)
EP-DNN 104,994 90.76
DEEP 105,030 86.43
RFECS 104,155 78.76
IMR90 Prediction # of Predictions Validation Rate (%)
EP-DNN 103,196 93.79
DEEP 103,751 93.28
RFECS 103,624 93.23