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Table 3 The top-ten predictions for four inherited retinal dystrophies

From: DIGNiFI: Discovering causative genes for orphan diseases using protein-protein interaction networks

Disease/Syndrome

Description

# of Known genes

Top 10 predictions

Missing

Retinitis pigmentosa

A collection of blinding conditions involving bilateral degerneration of rod and cone photoreceptors and resulting in progressive vision loss. Symptoms generally begin in childhood with the loss of peripheral vision, and most patients are legally blind by the age of 40

44

BBS4, GNAT1, RORB, MYO7A, MKKS, RBP4, PAX6, RPGRIP1, CDH23, MYO5A

ARL3, HK1

Leber congenital amaurosis

A disease involving early degeneration of the retina as well as defects in the cornea and leading to severe vision loss in infancy

9

RBP4, BBS4, RGS9, GNAT1, RPGR, USH2A, CNGB1, RHO, RP1, ARL6

none

Usher syndrome type 1

A form of retinitis pigmentosa that involves hearing impairment in addition to vision loss

5

DFNB31*, USH2A*, CLIC5, MYO3A, MYO15A, KPTN, IQCB1, BBS4, RP1, NPHP4

CEP250, HARS

Congenital stationary night blindness

A non-progressive, inherited disorder of the retina that from birth causes a number of vision problems, including difficulty seeing in low light conditions

8

CNGA1, GUCY2F, CNGB1, RCVRN, RGS9, OPN4, RP1, RPE65, GNB1, OPN1LW

GNB3, RDH5

  1. * = overlap with RetNet gene; Underline = overlap with a different retinal dystrophy; Bold = literature support