Table 5 Summary of differential gene expression analysis (see Additional file 1: Tables S5–S8)
From: Network reconstruction of the mouse secretory pathway applied on CHO cell transcriptome data
Condition | Not expressed | Total # analysed | # FDR < 0.05 | # |log2 FC| ≥ 2 | Up | Down | Disp | BCV |
|---|---|---|---|---|---|---|---|---|
IgG production | 8583 | 16,446 | 6540 | 1953 | 1542 | 411 | 0.0168 | 0.1296 |
Cultivation phases | 8583 | 16,446 | 4223 | 333 | 265 | 68 | 0.0168 | 0.1296 |
Secretion stress NaBu | 8132 | 16,897 | 8121 | 2857 | 2316 | 541 | 0.01497 | 0.1224 |
0% NEAA sup. | 9202 | 15,827 | 27 | 5 | 4 | 1 | 0.00588 | 0.0767 |