Graph-theoretical comparison of normal and tumor networks in identifying BRCA genes

BMC Systems Biology

Table 1 AUROC and AUPR values for all the defined graph-theoretical measures and the control measures

Reference database	Measurement	M _bw	M _{d e g1}	M _{d e g2}	M _cc	M _rw	M _gt	M _j1	M _j2	ED	MF
NCBI Bio systems	AUROC	0.770	0.740	0.702	0.703	0.606	0.569	0.603	0.577	0.597	0.563
NCBI Bio systems	AUPR	0.042	0.037	0.027	0.020	0.015	0.013	0.014	0.013	0.014	0.014
COSMIC	AUROC	0.709	0.695	0.664	0.641	0.635	0.611	0.611	0.601	0.586	0.567
COSMIC	AUPR	0.091	0.089	0.075	0.061	0.056	0.053	0.050	0.051	0.047	0.055

The first two rows are with respect to the NCBI BioSystems database and the last two rows are with respect to the COSMIC database

ISSN: 1752-0509