Skip to main content
Fig. 3 | BMC Systems Biology

Fig. 3

From: Putative human sperm Interactome: a networks study

Fig. 3

HSICN. The networks was spatially represented using the Cytoscape Prefuse Force Directed Layout. This program "is based on a" force-directed "paradigm. Network nodes are treated like physical objects that repel each other, such as electrons. The connections between nodes are treated like metal springs attached to the pair of nodes. These springs repel or attract their end points according to functional in force function. The layout algorithm sets the positions of the nodes in a way that minimizes the sum of forces in the network "(Cytoscape 3.4.0 User Manual http://manual.cytoscape.org/en/stable/index.html)). The node diameter is directly proportional to the degree node and the node color gradient was dependent from the clustering coefficient, from red (higher) to green (lower)

Back to article page