Table 2 Average test data results obtained in a synthetic data set using different models. Values for the Area Under the Curve (AUC), average number of selected genes (#genes), and average number of genes overlapped with the k=100 genes used to generate the synthetic outcome (#genes*) are shown
From: BLASSO: integration of biological knowledge into a regularized linear model
Model | AUC | #genes | #genes* |
|---|---|---|---|
LASSO 200 | 0.9920±0.00 | 137.9 | 88.7 |
LASSO 2000 | 0.9504±0.02 | 230.7 | 56.5 |
LASSO 20021 | 0.9325±0.03 | 286.8 | 24.8 |
LASSO 19921 | 0.8972±0.03 | 254.8 | 0 |
E1- BLASSO20021 | 0.9805±0.01 | 133.7 | 66.9 |
E2- BLASSO20021 | 0.9923±0.01 | 100 | 100 |