Table 1 The considered Mycobacterium strains
From: On the reconstruction of the ancestral bacterial genomes in genus Mycobacterium and Brucella
Accession (GenBank) | Organism name | Sequence length (bp) | Nickname |
|---|---|---|---|
CP010335.1 | Mycobacterium tuberculosis strain 2242 | 4,419,839 | tuberculosis1 |
CP010336.1 | Mycobacterium tuberculosis strain 2279 | 4,405,033 | tuberculosis2 |
NC_000962.3 | Mycobacterium tuberculosis H37Rv | 4,411,532 | tuberculosis3 |
NC_002755.2 | Mycobacterium tuberculosis CDC1551 | 4,403,837 | tuberculosis4 |
NC_009525.1 | Mycobacterium tuberculosis H37Ra | 4,419,977 | tuberculosis5 |
NC_009565.1 | Mycobacterium tuberculosis F11 | 4,424,435 | tuberculosis6 |
NC_012943.1 | Mycobacterium tuberculosis KZN 1435 | 4,398,250 | tuberculosis7 |
NC_016768.1 | Mycobacterium tuberculosis KZN 4207 | 4,394,985 | tuberculosis8 |
NC_016934.1 | Mycobacterium tuberculosis UT205 | 4,418,088 | tuberculosis9 |
NC_017522.1 | Mycobacterium tuberculosis CCDC5180 | 4,405,981 | tuberculosis10 |
NC_017524.1 | Mycobacterium tuberculosis CTRI-2 | 4,398,525 | tuberculosis11 |
NC_018078.1 | Mycobacterium tuberculosis KZN 605 | 4,399,120 | tuberculosis12 |
NC_018143.2 | Mycobacterium tuberculosis H37Rv | 4,411,709 | tuberculosis13 |
NC_020089.1 | Mycobacterium tuberculosis 7199-99 | 4,421,197 | tuberculosis14 |
NC_020559.1 | Mycobacterium tuberculosis str. Erdman = ATCC 35801 DNA | 4,392,353 | tuberculosis15 |
NC_021054.1 | Mycobacterium tuberculosis str. Beijing/NITR203 | 4,411,128 | tuberculosis16 |
NC_021194.1 | Mycobacterium tuberculosis EAI5/NITR206 | 4,390,306 | tuberculosis17 |
NC_021251.1 | Mycobacterium tuberculosis CCDC5079 | 4,414,325 | tuberculosis18 |
NC_021740.1 | Mycobacterium tuberculosis EAI5 | 4,391,174 | tuberculosis19 |
NC_022350.1 | Mycobacterium tuberculosis str | 4,408,224 | tuberculosis20 |
NZ_AP014573.1 | Mycobacterium tuberculosis str. Kurono DNA | 4,415,078 | tuberculosis21 |
NZ_CP002871.1 | Mycobacterium tuberculosis HKBS1 | 4,407,929 | tuberculosis22 |
NZ_CP002882.1 | Mycobacterium tuberculosis BT2 | 4,401,899 | tuberculosis23 |
NZ_CP002883.1 | Mycobacterium tuberculosis BT1 | 4,399,405 | tuberculosis24 |
NZ_CP002885.1 | Mycobacterium tuberculosis CCDC5180 | 4,414,346 | tuberculosis25 |
NZ_CP007027.1 | Mycobacterium tuberculosis H37RvSiena | 4,410,911 | tuberculosis26 |
NZ_CP007803.1 | Mycobacterium tuberculosis K | 4,385,518 | tuberculosis27 |
NZ_CP007809.1 | Mycobacterium tuberculosis strain KIT87190 | 4,410,788 | tuberculosis28 |
NZ_CP009100.1 | Mycobacterium tuberculosis strain ZMC13-264 | 4,411,507 | tuberculosis29 |
NZ_CP009101.1 | Mycobacterium tuberculosis strain ZMC13-88 | 4,411,515 | tuberculosis30 |
NZ_CP009426.1 | Mycobacterium tuberculosis strain 96075 | 4,379,376 | tuberculosis31 |
NZ_CP009427.1 | Mycobacterium tuberculosis strain 96121 | 4,410,945 | tuberculosis32 |
NZ_CP009480.1 | Mycobacterium tuberculosis H37Rv | 4,396,119 | tuberculosis33 |
NZ_CP010330.1 | Mycobacterium tuberculosis strain F28 | 4,421,903 | tuberculosis34 |
NZ_CP010337.1 | Mycobacterium tuberculosis strain 22115 | 4,401,829 | tuberculosis35 |
NZ_CP010338.1 | Mycobacterium tuberculosis strain 37004 | 4,417,090 | tuberculosis36 |
NZ_CP010339.1 | Mycobacterium tuberculosis strain 22103 | 4,399,422 | tuberculosis37 |
CP010340.1 | Mycobacterium tuberculosis strain 26105 | 4,426,489 | tuberculosis38 |
NZ_CP012090.1 | Mycobacterium tuberculosis W-148 | 4,418,548 | tuberculosis39 |
NZ_CP012506.1 | Mycobacterium tuberculosis strain SCAID 187.0 | 4,379,515 | tuberculosis40 |
NZ_HG813240.1 | Mycobacterium tuberculosis 49-02 | 4,412,379 | tuberculosis41 |
CP010329.1 | Mycobacterium tuberculosis strain F1 | 4,428,621 | tuberculosis42 |
NC_015758.1 | Mycobacterium africanum GM041182 | 4,389,314 | africanum1 |
CP010334.1 | Mycobacterium africanum strain 25 | 4,386,422 | africanum0 |
CP010333.1 | Mycobacterium microti strain 12 | 4,370,115 | microti |
NC_015848.1 | Mycobacterium canettii CIPT 140010059 | 4,482,059 | canettii0 |
NC_019951.1 | Mycobacterium canettii CIPT 140070010 | 4,525,948 | canettii1 |
NC_019950.1 | Mycobacterium canettii CIPT 140060008 | 4,432,426 | canettii2 |
NC_019952.1 | Mycobacterium canettii CIPT 140070017 | 4,524,466 | canettii3 |
NC_019965.1 | Mycobacterium canettii CIPT 140070008 | 4,420,197 | canettii4 |
NC_002945.3 | Mycobacterium bovis AF2122/97 | 4,345,492 | bovis0 |
NC_008769.1 | Mycobacterium bovis BCG Pasteur 1173P2 | 4,374,522 | bovis1 |
NC_012207.1 | Mycobacterium bovis BCG str. Tokyo 172 DNA | 4,371,711 | bovis2 |
NZ_CP003494.1 | Mycobacterium bovis BCG str. ATCC 35743 | 4,334,064 | bovis3 |
NC_016804.1 | Mycobacterium bovis BCG str. Mexico | 4,350,386 | bovis4 |
NC_020245.2 | Mycobacterium bovis BCG str. Korea 1168P | 4,376,711 | bovis5 |
NZ_CP009449.1 | Mycobacterium bovis strain ATCC BAA-935 | 4,358,088 | bovis6 |
NZ_AM412059.1 | Mycobacterium bovis BCG str. Moreau RDJ | 4,340,116 | bovis7 |
NZ_CP008744.1 | Mycobacterium bovis BCG strain 3281 | 4,410,431 | bovis8 |
NZ_CP012095.1 | Mycobacterium bovis strain 1595 | 4,351,712 | bovis9 |
NZ_CP009243.1 | Mycobacterium bovis BCG strain Russia 368 | 4,370,138 | bovis10 |
NZ_CP013741.1 | Mycobacterium bovis strain BCG-1 (Russia) | 4,370,705 | bovis11 |
CP010331.1 | Mycobacterium bovis BCG strain 26 | 4,351,313 | bovis12 |
CP010332.1 | Mycobacterium bovis strain 30 | 4,336,227 | bovis13 |
NZ_CP014566.1 | Mycobacterium bovis BCG str. Tokyo 172 substrain TRCS | 4,371,707 | bovis14 |