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Table 1 Significant TFs obtained using the Chi-square method and the multivariate regression model

From: Multiple transcription factors contribute to inter-chromosomal interaction in yeast

Chi-square method Multivariate regression model
TF p < 0.05 Adjusted p < 0.05 TF # times selected
Sut1 39 33 Cin5a 2466
Azf1 38 34 Rlr1a 2032
Cin5a 38 23 Dig1a 1558
Opi1a 38 23 Ydr026ca 1286
Gcr1 38 22 Sok2 1235
Stp1 37 27 Spt2a 1037
Met4 36 23 Sko1a 783
Spt2a 34 16 Rlm1 556
Swi5 34 12 Adr1a 458
Sko1a 32 24 Ste12a,b 381
Ste12a,b 31 0 Hsf1a 376
Rlr1a 30 20 Uga3 360
Hsf1a 30 15 Opi1a 234
Tye7 29 20 Reb1 224
Cbf1 28 18 Pdr3 211
Phd1 28 14 Stb4 177
Skn7 26 15 Gat1 137
Ydr026ca 26 1  
Dig1a 25 10
Adr1a 25 8
  1. a Overlapping between two methods
  2. b Ste12 was not among the significant TF list but was manually selected because it contained more than 30 raw p < 0.05 and have several marginal adjusted p ~ 0.05