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Table 3 Gene Ontology terms associated with top 100 hub genes of the enzalutamide resistance-modulated differential network

From: scdNet: a computational tool for single-cell differential network analysis

Category

Term

Gene count

P-value

Annotation Cluster 1 (Enrichment Score: 3.43)

 CC

GO:0044429~mitochondrial part

15

5.6 × 10−6

 CC

GO:0005739~mitochondrion

19

2.9 × 10−5

 CC

GO:0031980~mitochondrial lumen

8

3.1 × 10−4

Annotation Cluster 2 (Enrichment Score: 3.17)

 CC

GO:0044429~mitochondrial part

15

5.6 × 10−6

 CC

GO:0005740~mitochondrial envelope

12

2.4 × 10−5

 CC

GO:0005739~mitochondrion

19

2.9 × 10−5

Annotation Cluster 3 (Enrichment Score: 2.38)

 CC

GO:0031974~membrane-enclosed lumen

26

1.9 × 10−5

 CC

GO:0070013~intracellular organelle lumen

24

9.0 × 10−5

 CC

GO:0043233~organelle lumen

24

1.3 × 10−4

Annotation Cluster 4 (Enrichment Score: 1.90)

 MF

GO:0003743~translation initiation factor activity

5

4.6 × 10−4

 MF

GO:0008135~translation factor activity, nucleic acid binding

5

2.7 × 10−3

 BP

GO:0006412~translation

8

3.2 × 10−3

Annotation Cluster 5 (Enrichment Score: 1.74)

 BP

GO:0016071~mRNA metabolic process

8

5.8 × 10−3

 BP

GO:0006397~mRNA processing

7

1.1 × 10−2

 BP

GO:0000375~RNA splicing, via transesterification reactions

5

1.2 × 10− 2

  1. Each cluster is represented by the top three terms
  2. Abbreviations: BP biological process, CC cellular component, MF molecular function