From: GNE: a deep learning framework for gene network inference by aggregating biological information
Methods
Yeast
E. coli
AUROC
AUPR
LINE
0.620
0.611
0.569
0.598
node2vec
0.640
0.609
0.587
0.599
GNE (our model)
0.710
0.683
0.653
0.658