Table 3 Average confidence values for Markov relations features for the 7 highest-confidence gene pairs derived from the Golub et al. data [17] in a BN analysis using no prior seeds or priors derived from the literature.
From: Seeded Bayesian Networks: Constructing genetic networks from microarray data
Gene pairs | Average no prior | Average prior | t-test p-value | |
|---|---|---|---|---|
SMARCA4_2 | SMARCA4 | 0.4575 | 0.965 | 0.001473 |
SRP9 | CBX1 | 0.476667 | 0.96 | 0.001508 |
GTF2E2 | TMPO | 0.148333 | 0.938333 | 2.54 × 10-6 |
RBBP4 | SMARCA4_2 | 0.15375 | 0.912083 | 1.43 × 10-5 |
CD79A | DHPS | 0.135417 | 0.895833 | 1.35 × 10-5 |
FAH | MCM3 | 0.187917 | 0.881667 | 4.93 × 10-5 |
FAH | PSMA6 | 0.283333 | 0.79625 | 0.001547 |