Skip to main content
Download PDF

Erratum to: ppiPre: predicting protein-protein interactions by combining heterogeneous features

BMC Systems Biology volume 9, Article number: 50 (2015) Cite this article

The Original Article was published on 14 October 2013

Erratum

The authors wish to acknowledge that the software package associated with our Research Article [1], under the name ‘ppiPre’, re-used software code for some of its functions from an existing software package, GOSemSim [2], without proper attribution and in breach of the software’s licencing terms. Additionally we neglected to cite the article by Yu et al. [3] describing the GoSemSim software.

The software code from GoSemSim [2] is used in the implementation of two GO semantic similarity measures, TCSS and IntelliGO. ppiPre additionally implements a KEGG-based similarity measure and three topological similarity measures, and integrates features with a support vector machine.

We have now updated our software package such that it is licensed under a compatible GPL version 2 licence, and revised the package to give the appropriate attribution.

We apologize for any inconvenience this oversight may have caused.

Availability and Requirements

References

  1. Yue D, Lin G, Bingbo W. ppiPre: predicting protein-protein interactions by combining heterogeneous features. BMC Syst Biol. 2013;7 Suppl 2:S8.

    Article  Google Scholar 

  2. Guangchuang Yu. GOSemSim. http://www.bioconductor.org/packages/release/bioc/html/GOSemSim.html. (Accessed 7 July 2015)

  3. Yu G, Li F, Qin Y, Bo X, Wu Y, Wang S. GOSemSim: an R package for measuring semantic similarity among GO terms and gene products. Bioinformatics. 2010;26:976–8.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. School of Computer Science and Technology, Xidian University, Xi’an, 710071, PR China

    Yue Deng, Lin Gao & Bingbo Wang

  2. Institute of Software Engineering, Xidian University, Xi’an, 710071, PR China

    Yue Deng

Authors
  1. Yue Deng
    View author publications

    You can also search for this author in PubMed Google Scholar

  2. Lin Gao
    View author publications

    You can also search for this author in PubMed Google Scholar

  3. Bingbo Wang
    View author publications

    You can also search for this author in PubMed Google Scholar

Corresponding author

Correspondence to Lin Gao.

Additional information

The online version of the original article can be found under doi:10.1186/1752-0509-7-S2-S8.

Rights and permissions

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

Reprints and Permissions

About this article

Verify currency and authenticity via CrossMark

Cite this article

Deng, Y., Gao, L. & Wang, B. Erratum to: ppiPre: predicting protein-protein interactions by combining heterogeneous features. BMC Syst Biol 9, 50 (2015). https://doi.org/10.1186/s12918-015-0196-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1186/s12918-015-0196-5

BMC Systems Biology

ISSN: 1752-0509

Contact us