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Table 2 Overlapping genes between the heuristic and optimal solutions of MCDS for modules of the breast cancer network. The names of the modules were introduced in the original ref. [9]

From: Identification of key player genes in gene regulatory networks

Module

Shared genes

Count

black

SEC24B, ZNF254, ZNF681

3

green

UTP14A, LTBR, SH3GLB2,

 
 

OS9, CDC34, CDC37, AKT1

7

magenta

BGLAP, ATF6, ILF2

3

pink

ZNF706, TCEB1, TMEM70

3

red

FHL3, SUMF2, RPS3A, PCGF1,

 
 

EPN3, GTF3A, ATP1B1

7

yellow

FUT4, SPI1, DFNA5, CASP10, PAG1,

 
 

HDAC11, LCP2, TRAF3IP3, HTRA4, TSPAN2, GZMK

9

blue

ACAN, FAM54A

2

  1. The modules brown and turquoise have only 1 mcds gene and give 100 % overlap