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  1. Content type: Software

    The 16S rRNA gene-based amplicon sequencing analysis is widely used to determine the taxonomic composition of microbial communities. Once the taxonomic composition of each community is obtained, evolutionary r...

    Authors: Hiroshi Mori, Takayuki Maruyama, Masahiro Yano, Takuji Yamada and Ken Kurokawa

    Citation: BMC Systems Biology 2018 12(Suppl 2):30

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  2. Content type: Research

    Transcriptomic datasets often contain undeclared heterogeneity arising from biological variation such as diversity of disease subtypes, treatment subgroups, time-series gene expression, nested experimental con...

    Authors: Abha Belorkar, Rajanikanth Vadigepalli and Limsoon Wong

    Citation: BMC Systems Biology 2018 12(Suppl 2):28

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  3. Content type: Research

    Recently, there have been several attempts to produce long-chain dicarboxylic acids (DCAs) in various microbial hosts. Of these, Yarrowia lipolytica has great potential due to its oleaginous characteristics and u...

    Authors: Pranjul Mishra, Na-Rae Lee, Meiyappan Lakshmanan, Minsuk Kim, Byung-Gee Kim and Dong-Yup Lee

    Citation: BMC Systems Biology 2018 12(Suppl 2):12

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  4. Content type: Research

    Identifying gene regulatory networks is an important task for understanding biological systems. Time-course measurement data became a valuable resource for inferring gene regulatory networks. Various methods h...

    Authors: Sungjoon Park, Jung Min Kim, Wonho Shin, Sung Won Han, Minji Jeon, Hyun Jin Jang, Ik-Soon Jang and Jaewoo Kang

    Citation: BMC Systems Biology 2018 12(Suppl 2):20

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  5. Content type: Research

    Regeneration is an important biological process for the restoration of organ mass, structure, and function after damage, and involves complex bio-physiological mechanisms including cell differentiation and imm...

    Authors: Fang-Yu Liu, Te-Cheng Hsu, Patrick Choong, Min-Hsuan Lin, Yung-Jen Chuang, Bor-Sen Chen and Che Lin

    Citation: BMC Systems Biology 2018 12(Suppl 2):29

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  6. Content type: Research

    One of the crucial steps toward understanding the associations among molecular interactions, pathways, and diseases in a cell is to investigate detailed atomic protein-protein interactions (PPIs) in the struct...

    Authors: Sing-Han Huang, Yu-Shu Lo, Yong-Chun Luo, Yu-Yao Tseng and Jinn-Moon Yang

    Citation: BMC Systems Biology 2018 12(Suppl 2):13

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  7. Content type: Research

    Ginseng is a popular traditional herbal medicine in north-eastern Asia. It has been used for human health for over thousands of years. With the rise in global temperature, the production of Korean ginseng (Pan...

    Authors: Inuk Jung, Hyejin Kang, Jang Uk Kim, Hyeonsook Chang, Sun Kim and Woosuk Jung

    Citation: BMC Systems Biology 2018 12(Suppl 2):27

    Published on:

    This article is part of a Supplement: Volume 12 Supplement 2

  8. Content type: Review Article

    Blood transfusions are an important part of modern medicine, delivering approximately 85 million blood units to patients annually. Recently, the field of transfusion medicine has started to benefit from the “o...

    Authors: James T. Yurkovich, Aarash Bordbar, Ólafur E. Sigurjónsson and Bernhard O. Palsson

    Citation: BMC Systems Biology 2018 12:31

    Published on:

  9. Content type: Research Article

    Muscle atrophy, an involuntary loss of muscle mass, is involved in various diseases and sometimes leads to mortality. However, therapeutics for muscle atrophy thus far have had limited effects. Here, we presen...

    Authors: Jinmyung Jung, Mijin Kwon, Sunghwa Bae, Soorin Yim and Doheon Lee

    Citation: BMC Systems Biology 2018 12:26

    Published on:

  10. Content type: Research Article

    The efficacy of antibiotics against M. tuberculosis has been shown to be influenced by experimental media conditions. Investigations of M. tuberculosis growth in physiological conditions have described an environ...

    Authors: Erol S. Kavvas, Yara Seif, James T. Yurkovich, Charles Norsigian, Saugat Poudel, William W. Greenwald, Sankha Ghatak, Bernhard O. Palsson and Jonathan M. Monk

    Citation: BMC Systems Biology 2018 12:25

    Published on:

  11. Content type: Correction

    After publication of the article [1], it has been brought to our attention that an author’s name was spelt incorrectly in the original published article. Yonghua Wang was previously spelt “Yonghua Wan”. This h...

    Authors: Mohamed Shahen, Zihu Guo, Akhtar Hussain Shar, Reham Ebaid, Qin Tao, Wenjuan Zhang, Ziyin Wu, Yaofei Bai, Yingxue Fu, Chunli Zheng, He Wang, Piar Ali Shar, Jianling Liu, Zhenzhong Wang, Wei Xiao and Yonghua Wang

    Citation: BMC Systems Biology 2018 12:21

    Published on:

    The original article was published in BMC Systems Biology 2018 12:2

  12. Content type: Research article

    With the global emergence of multi-drug resistant strains of Mycobacterium tuberculosis, new strategies to treat tuberculosis are urgently needed such as therapeutics targeting potential human host factors.

    Authors: Zhang Wang, Seda Arat, Michal Magid-Slav and James R. Brown

    Citation: BMC Systems Biology 2018 12:3

    Published on:

  13. Content type: Research Article

    Dengue virus (DENV) is an increasing global health threat and associated with induction of both a long-lived protective immune response and immune-suppression. So far, the potency of treatment of DENV via anti...

    Authors: Mohamed Shahen, Zihu Guo, Akhtar Hussain Shar, Reham Ebaid, Qin Tao, Wenjuan Zhang, Ziyin Wu, Yaofei Bai, Yingxue Fu, Chunli Zheng, He Wang, Piar Ali Shar, Jianling Liu, Zhenzhong Wang, Wei Xiao and Yonghua Wang

    Citation: BMC Systems Biology 2018 12:2

    Published on:

    The Correction to this article has been published in BMC Systems Biology 2018 12:21

  14. Content type: Methodology Article

    Many mathematical models have now been employed across every area of systems biology. These models increasingly involve large numbers of unknown parameters, have complex structure which can result in substanti...

    Authors: Ian Vernon, Junli Liu, Michael Goldstein, James Rowe, Jen Topping and Keith Lindsey

    Citation: BMC Systems Biology 2018 12:1

    Published on:

  15. Content type: Research Article

    Photosynthetic (PS) gene expression in Rhodobacter sphaeroides is regulated in response to changes in light and redox conditions mainly by PrrB/A, FnrL and AppA/PpsR systems. The PrrB/A and FnrL systems activate ...

    Authors: Rakesh Pandey, Judith P. Armitage and George H. Wadhams

    Citation: BMC Systems Biology 2017 11:146

    Published on:

  16. Content type: Research article

    Osmanthus fragrans has been used as folk medicine for thousands of years. The extracts of Osmanthus fragrans flowers were reported to have various bioactivities including free radical ...

    Authors: Le Wang, Nana Tan, Jiayao Hu, Huan Wang, Dongzhu Duan, Lin Ma, Jian Xiao and Xiaoling Wang

    Citation: BMC Systems Biology 2017 11:144

    Published on:

  17. Content type: Research

    Identification of novel gene-gene relations is a crucial issue to understand system-level biological phenomena. To this end, many methods based on a correlation analysis of gene expressions or structural analy...

    Authors: Maulida Mazaya, Hung-Cuong Trinh and Yung-Keun Kwon

    Citation: BMC Systems Biology 2017 11(Suppl 7):133

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

  18. Content type: Research

    Effectively predicting protein complexes not only helps to understand the structures and functions of proteins and their complexes, but also is useful for diagnosing disease and developing new drugs. Up to now...

    Authors: Ying Xu, Jiaogen Zhou, Shuigeng Zhou and Jihong Guan

    Citation: BMC Systems Biology 2017 11(Suppl 7):135

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

  19. Content type: Research

    In recent years, the integration of ‘omics’ technologies, high performance computation, and mathematical modeling of biological processes marks that the systems biology has started to fundamentally impact the ...

    Authors: Zhiwei Ji, Bing Wang, Ke Yan, Ligang Dong, Guanmin Meng and Lei Shi

    Citation: BMC Systems Biology 2017 11(Suppl 7):127

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

  20. Content type: Research

    Drug development considering individual varieties among patients becomes crucial to improve clinical development success rates and save healthcare costs. As a useful tool to predict individual phenomena and co...

    Authors: Shun Asami, Daisuke Kiga and Akihiko Konagaya

    Citation: BMC Systems Biology 2017 11(Suppl 7):129

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

  21. Content type: Research

    Detecting causality for short time-series data such as gene regulation data is quite important but it is usually very difficult. This can be used in many fields especially in biological systems. Recently, seve...

    Authors: Ben-gong Zhang, Weibo Li, Yazhou Shi, Xiaoping Liu and Luonan Chen

    Citation: BMC Systems Biology 2017 11(Suppl 7):128

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

  22. Content type: Research

    Genome-scale metabolic models provide an opportunity for rational approaches to studies of the different reactions taking place inside the cell. The integration of these models with gene regulatory networks is...

    Authors: Daniel Trejo Banos, Pauline Trébulle and Mohamed Elati

    Citation: BMC Systems Biology 2017 11(Suppl 7):134

    Published on:

    This article is part of a Supplement: Volume 11 Supplement 7

Page 2 of 77

2016 Journal Metrics

  • Citation Impact
    2.303 - 2-year Impact Factor
    2.526 - 5-year Impact Factor
    0.735 - Source Normalized Impact per Paper (SNIP)
    1.144 - SCImago Journal Rank (SJR)

    Usage 
    804,289 downloads
    1233 Usage Factor


    Social Media Impact
    134 mentions

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